Things to Know When Talking About Race and Genetics

Posted in Anthropology, Articles, Health/Medicine/Genetics, Media Archive on 2014-05-19 02:35Z by Steven

 

Things to Know When Talking About Race and Genetics

Psychology Today
2014-05-13

Agustín Fuentes, Professor of Anthropology
University of Notre Dame

On May 5th, 2014, I shared the platform in a webinar debate with Nicholas Wade (former NYTimes Science Writer) about his new book “A Troublesome Inheritance – A discussion on genes, race and human history.” The debate was sponsored by the American Anthropological Association.

Wade’s assertions in the book (and our discussion) are that Humans are divided into genetically identified “continental races” and that there are significant differences in genetically based social behaviors between these “races” as a result of the last 50,000 years of human evolution.

Wade argues that social scientists are covering up these ideas and claims that a true discussion on race is repressed by most academics out of political correctness. These points were also made by Charles Murray in a laudatory review of Wade’s book in the Wall Street Journal. They are both wrong.

I am an academic and I love to talk about the data on race, so do many of my colleagues. The scientific data on human genetic variation and human evolution refute the claims there are multiple biological races in humans today and in the debate I offered articles, datasets, and work by biologists, geneticists, evolutionary theorists and even anthropologists to demonstrate this. Unfortunately, in such discussions the bulk of data, and its complexity, are too often ignored.

Avoiding direct challenge is a common tactic by people trying to use select slices of genetic data to “prove” that there are multiple biological races in humans today. This is a problem because dialogue on such an important topic should be encouraged and as open minded as possible, but it must also be accurately informed by the science of human biology. So here is a mini-primer on what we what we know about human genetics to help such a discussion (see the bibliography at the bottom of this post for very good articles on the topic)…

…5) Nearly all the genetic variation in our entire species is found in populations just in Africa, with most of the variation found in all populations outside of Africa making up a small subset of that variation…

…Given these facts, here is the key argument you need to remember: While different populations vary in some of the .1% of the genome, the way this variation is distributed does not map to biological races, either by continent or otherwise.

For example, when you compare people from Nigeria, Western Europe and Beijing you do get some patterned differences…but these specific groups do not reflect the entire continental areas of Africa, Europe, and Asia (the proposed “continental races” of African, Caucasian and Asian). There are no genetic patterns that link all populations in just Africa, just Asia or just Europe to one another to the exclusion of other populations in other places. If you compare geographically separated populations within the “continental” areas you get the same kind of variation as you would between them. Comparing Nigerians to Western Europeans to people from Beijing gives us the same kind of differences in variation patterns as does comparing people from Siberia, Tibet and Java, or from Finland, Wales and Yemen, or even Somalia, Liberia and South Africa— and none of these comparisons demonstrates “races.”…

Read the entire article here.

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Is Race/Ethnicity Related to Presence or Severity of Pain in Colorectal and Lung Cancer?

Posted in Articles, Health/Medicine/Genetics, United States on 2014-04-25 07:46Z by Steven

Is Race/Ethnicity Related to Presence or Severity of Pain in Colorectal and Lung Cancer?

Journal of Pain and Symptom Management
Published online: 2014-04-18
DOI: 10.1016/j.jpainsymman.2014.02.005

Kathryn A. Martinez, PhD, MPH, Postdoctoral Fellow
CanSORT (Cancer Surveillance & Outcomes Research Team)
Ann Arbor VA Health Services Research & Development Center,
University of Michgan, Ann Arbor

Claire F. Snyder, PhD, Associate Professor of Internal Medicine
Johns Hopkins Univesity Shchool of Medicine, Baltimore, Maryand

Jennifer L. Malin, MD, PhD
Wellpoint, Thousand Oaks, Calfornia; Jonsson Comprehensive Cancer Center and David Geffen School of Medicine, University of California, Los Angeles

Sydney M. Dy, MD, MSc, Physician Leader, Duffey Pain and Palliative Care Program, Hopkins Kimmel Cancer Center; Associate Professor
Deparmemt of Health Management and Policy
Johns Hopkins Bloomberg School of Public Health

Context

Developing interventions to address racial/ethnic cancer pain disparities requires exploration of the role of socioeconomic status, health status, and pain severity from the time of diagnosis.

Objectives

To examine patterns of disparities in cancer pain by evaluating differences by race/ethnicity in the odds of reporting pain and in pain severity, controlling for key patient-level covariates.

Methods

This study used data from a nationally representative cohort of colorectal and lung cancer patients. Multivariable logistic regression was conducted to examine the relationship between race/ethnicity and reporting pain. Multivariable linear regression was then conducted, among those who reported pain, to determine differences in pain severity by race/ethnicity.

Results

The cohort included 5,761 individuals (14% black, 7% Hispanic/Latino, 6% Asian or Pacific Islander, and 3% multiracial) among whom 48% reported pain. The adjusted odds of reporting differed only for multiracial patients, who were more likely to report pain than whites (OR:1.54; p=0.036). However, among those with pain, severity was higher for black patients (β=6.6; p≤0.001) and multiracial patients (β=4.5; p=0.036) relative to white patients. Lower educational attainment, depressed affect, and lower levels of wealth were also associated with higher pain severity.

Conclusion

While the odds of experiencing pain differed only for multiracial patients, among those reporting pain, both blacks and multiracial individuals reported higher pain severity than whites. Sociodemographic status, health status, and depression were associated with severity but did not explain the disparity. Interventions to address these disparities will need to address reported severity as well as patient-level factors.

Read or purchase the article here.

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Abuse of Modernity: Japanese Biological Determinism and Identity Management in Colonial Korea

Posted in Articles, Asian Diaspora, Health/Medicine/Genetics, History, Media Archive on 2014-04-21 01:24Z by Steven

Abuse of Modernity: Japanese Biological Determinism and Identity Management in Colonial Korea

Cross-Currents: East Asian History and Culture Review
Number 10, March 2014
26 pages

Mark Caprio
Rikkyo University, Ikebukuro, Tokyo, Japan

Medical researcher Kubo Takeshi’s contributions to professional publications, such as Chōsen igakkai zasshi (The Korean medical journal), and more popular magazines, such as Chōsen oyobi Manshū (Korea and Manchuria), reflected many of the prejudicial attitudes that Japanese held toward Koreans during the first decade of colonial rule. His scholarship was based on biological determinist thinking, an approach developed by eighteenth-century European medical researchers to establish race, class, and gender hierarchies. For Kubo this approach provided a means for exploiting scientific inquiry to establish and manage Japanese superiority over Korean subjects in a more stable manner than one based on more malleable cultural differences. A people could adjust its customs or mannerisms to amalgamate with a suzerain culture but could not do so with hereditarily determined features, such as blood type or cranium size, shape, or weight. Practitioners, however, often linked the physical with the cultural by arguing that a people’s physical structure was a product of its cultural heritage. The subjectivity injected into this seemingly objective research methodology abused the lay community’s blind trust in modern science in two ways. First, it employed this inquiry to verify biased observations, rather than to uncover new truths; second, it altered the approach, rather than the conclusions, when this inquiry demonstrated the desired truths to be inaccurate. Biological determinism proved useful in substantiating a Japanese-Korean colonial relationship that acknowledged historically similar origins while arguing for the historically different evolutions of the two peoples.

Read the entire article here.

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Race

Posted in Audio, Health/Medicine/Genetics, Media Archive on 2014-04-21 01:12Z by Steven

Race

Radiolab
Season 5, Episode 3, April 2014


Shea Walsh

This hour of Radiolab, a look at race.

When the human genome was first fully mapped in 2000, Bill Clinton, Craig Venter, and Francis Collins took the stage and pronounced that “The concept of race has no genetic or scientific basis.” Great words spoken with great intentions. But what do they really mean, and where do they leave us? Our genes are nearly all the same, but that hasn’t made race meaningless, or wiped out our evolving conversation about it.

Guests: Ali Abbas, Dr. Jay Cohn, Richard Cooper, Troy Duster, Tony Frudakis, Malcolm Gladwell, Nell Greenfieldboyce, Wayne Joseph and David Sherrin

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Validity of Infant Race/Ethnicity from Birth Certificates in the Context of U.S. Demographic Change

Posted in Articles, Census/Demographics, Health/Medicine/Genetics, Media Archive, Social Work, United States on 2014-04-17 21:45Z by Steven

Validity of Infant Race/Ethnicity from Birth Certificates in the Context of U.S. Demographic Change

Health Services Research
Volume 49, Issue 1 (February 2014)
pages 249–267
DOI: 10.1111/1475-6773.12083

Lisa Reyes Mason, Assistant Professor of Social Work
University of Tennessee, Knoxville

Yunju Nam, Associate Professor of Social Work
State University of New York, Buffalo

Youngmi Kim, Assistant Professor of Social Work
Virginia Commonwealth University

Objective

To compare infant race/ethnicity based on birth certificates with parent report of infant race/ethnicity in a survey.

Data Sources

The 2007 Oklahoma birth certificates and SEED for Oklahoma Kids baseline survey.

Study Design

Using sensitivity scores and positive predictive values, we examined consistency of infant race/ethnicity across two data sources (N = 2,663).

Data Collection/Extraction Methods

We compared conventional measures of infant race/ethnicity from birth certificate and survey data. We also tested alternative measures that allow biracial classification, determined from parental information on the infant’s birth certificate or parental survey report.

Principal Findings

Sensitivity of conventional measures is highest for whites and African Americans and lowest for Hispanics; positive predictive value is highest for Hispanics and African Americans and lowest for American Indians. Alternative measures improve values among whites but yield mostly low values among minority and biracial groups.

Conclusions

Health disparities research should consider the source and validity of infant race/ethnicity data when creating sampling frames or designing studies that target infants by race/ethnicity. The common practice of assigning the maternal race/ethnicity as infant race/ethnicity should continue to be challenged.

Read or purchase the article here.

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Book Release of Prof. Lundy Braun’s Breathing Race into the Machine

Posted in Africa, Articles, Health/Medicine/Genetics, History, Media Archive, Slavery, South Africa, United Kingdom, United States on 2014-04-15 19:20Z by Steven

Book Release of Prof. Lundy Braun’s Breathing Race into the Machine

Brown University
Providence, Rhode Island
Program in Science and Technology Studies
2014-03-26

This February, Royce Family Professor in Teaching Excellence, professor of medical science and Africana studies, and a member of the Science and Technology Studies Program, Lundy Braun released her new book Breathing Race into the Machine: The Surprising Career of the Spirometer from Plantation to Genetics.

In her book, Lundy Braun traces the little-known history of the spirometer to reveal the ways medical instruments have worked to naturalize racial and ethnic differences, from Victorian Britain to today. An unsettling account of the pernicious effects of racial thinking that divides people along genetic lines, this book helps us understand how race enters into science and shapes medical research and practice.

In the antebellum South, plantation physicians used a new medical device—the spirometer—to show that lung volume and therefore vital capacity were supposedly less in black slaves than in white citizens. At the end of the Civil War, a large study of racial difference employing the spirometer appeared to confirm the finding, which was then applied to argue that slaves were unfit for freedom. What is astonishing is that this example of racial thinking is anything but a historical relic…

Read the entire article here.

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Approaching race as a social rather than biological construct

Posted in Articles, Health/Medicine/Genetics, Media Archive, United States on 2014-04-13 11:59Z by Steven

Approaching race as a social rather than biological construct

The Daily Pennsylvanian
Philadelphia, Pennsylvania
2014-04-08

Laura Anthony

The Program on Race, Science and Society will examine the role of race in scientific research at upcoming symposium

In 1851, University of Pennsylvania Perelman School of Medicine graduate Samuel Cartwright delivered a report to the Medical Association of Louisiana claiming that blacks’ health was improved by slavery.

He theorized that forced physical labor improved blacks’ inferior lung capacity, so slavery was actually a necessity to bettering their health.

Penn Law School professor Dorothy Roberts first heard this anecdote from a talk by Brown University professor Lundy Braun detailing the history of the spirometer, a medical device used to measure lung capacity.

Some spirometers historically, and even in modern medicine, adjust the measurements according to the race of the patient. Cartwright used the device to justify the need for continued slavery to protect blacks’ health. Braun’s presentation included a picture of a modern spirometer with a button labeled “race,” and through numerous conversations with medical students, Roberts has found that some medical students are still trained to use spirometers based on patients’ race.

For Roberts, this is a major problem. “My definition of race is that it is a political system to govern people based on invented biological demarcation, and it is not a natural division of human beings,” she said. “So it is much more plausible that inequities in health that fall along racial lines are caused by social determinants.”

Braun’s talk sparked an idea for a future project in the new program she developed at Penn this year called the Program on Race, Science and Society…

Read the entire article here.

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Penn symposium tackles race, science, and society

Posted in Articles, Health/Medicine/Genetics, Media Archive, United States on 2014-04-06 04:26Z by Steven

Penn symposium tackles race, science, and society

Penn Current: News Ideas and conversations from the University of Pennsylvania
University of Pennsylvania
2014-04-03

Katherine Unger Baillie

Is race a biological category? How does race figure into scientific research, clinical practice, and the development and use of biotechnology and pharmaceuticals? And what can we learn from historical investigations into race that will inform today’s scientific and medical inquiries?

These are among the complex questions that will be addressed by panels of experts during the April 11 symposium, “The Future of Race: Regression or Revolution?”

The event is being co-hosted by Penn’s new Program on Race, Science and Society (PRSS), which is based in the Center for Africana Studies, and the Penn Museum. The Center for Africana Studies is also co-sponsoring the symposium. The event will be held in the Museum’s Widener Lecture Hall from 9 a.m. to 3 p.m. The symposium is free and open to the public, though registration is required…

Read the entire article here.

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Ancestry Informative Markers Clarify the Regional Admixture Variation in the Costa Rican Population

Posted in Articles, Caribbean/Latin America, Health/Medicine/Genetics, Media Archive on 2014-04-05 19:48Z by Steven

Ancestry Informative Markers Clarify the Regional Admixture Variation in the Costa Rican Population

Human Biology
Volume 85, Number 5, October 2013
pages 721-740
DOI: 10.1353/hub.2013.0041

Rebeca Campos-Sánchez
Universidad de Costa Rica, San José, Costa Rica

Henriette Raventós, Associate Professor and Researcher
Universidad de Costa Rica, San José, Costa Rica

Ramiro Barrantes, Professor of Biology
Universidad de Costa Rica, San José, Costa Rica

The genetic structure of Costa Rica’s population is complex, both by region and by individual, due to the admixture process that started during the 15th century and historical events thereafter. Previous studies have been done mostly on Amerindian populations and the Central Valley inhabitants using various microsatellites and mitochondrial DNA markers. Here, we study for the first time a random sample from all regions of the country with ancestry informative markers (AIMs) to address the individual and regional admixture proportions. A sample of 160 male individuals was screened for 78 AIMs customized in a GoldenGate platform from Illumina. We observed that this small set of AIMs has the same power of hundreds of microsatellites and thousands of single-nucleotide polymorphisms to evaluate admixture, with the benefit of reducing genotyping costs. This type of investigation is necessary to explore new genetic markers useful for forensic and genetic investigation. Our data showed a mean admixture proportion of 49.2% European (EUR), 37.8% Native American (NAM), and 12.9% African (AFR), with a disproportionate admixture composition by region. In addition, when Chinese (CHB) was included as a fourth component, the proportions changed to 45.6% EUR, 33.5% NAM, 11.7% AFR, and 9.2% CHB. The admixture trend is consistent among all regions (EUR > NAM > AFR), and individual admixture estimates vary broadly in each region. Though we did not find stratification in Costa Rica’s population, gene admixture should be evaluated in future genetic studies of Costa Rica, especially for the Caribbean region, as it contains the largest proportion of African ancestry (30.9%).

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We Are all Mutants: Uncovering humanity’s vast diversity

Posted in Articles, Health/Medicine/Genetics, Media Archive on 2014-03-24 20:42Z by Steven

We Are all Mutants: Uncovering humanity’s vast diversity

The Chronicle Review
The Chronicle of Higher Education
2014-03-24

Paul Voosen, Senior Reporter

On the hunt for disease genes, researchers uncover humanity’s vast diversity

The first people to set foot on Barbados, a wind-battered eastern spur of the Caribbean’s Lesser Antilles, came from the south, and relatively recently, no more than 1,700 years ago. Little remains of them: enough to know they were skilled farmers from the Orinoco Basin, in modern Venezuela. And like those of all humanity, their journey had started far earlier, when their ancestors, tens of thousands of years before, ventured out of Africa, across Asia, and into the Americas.

More people rolled in: The Lokano, clustered in scattered villages, hauling whelk and conch from the sea; and, in the 13th century, the Kalinagos, slipping on to the horizon in 50-foot-long dugout canoes. The Kalinagos reigned until the conquistadors. Hounded by European slavers, they fled windward to better defenses. By 1536, a Portuguese explorer could report Barbados as “uninhabited.”

It didn’t last. The English landed a century later and soon began importing slaves, ripped from their Ga, Igbo, and Ashanti communities in West Africa. By 1700, some 134,500 Africans lived in Barbados, in bondage; soon enough, 90 percent of Barbados’s population could claim African heritage, a percentage that holds true today.

A couple of decades ago, there was one more arrival: Kathleen C. Barnes, a graduate student and biological anthropologist from the University of Florida, who one day in 1991 walked into the emergency room of Barbados’s main hospital, the Queen Elizabeth. Throughout its human history, the island had had its share of plagues and troubles. Now Barnes was there to study a modern, quiet epidemic.

In a dedicated bay, child after child sat listless, worried mothers by their sides. The children were masked, inhaling medication for their wheezing, swollen airways. The machines hissed. Nearly one-fifth of Barbadians had asthma, far above the global average. Barnes wanted to find out why.

A native of a Virginia tobacco town known for housing the “Last Capitol of the Confederacy,” Barnes, who is white, grew up a witness to the civil-rights movement; in second grade, her school was forcibly desegregated. Trained initially as a nurse, she was troubled by the health disparities she saw in the United States. For example, African-Americans suffered from asthma far more than white populations did. There were many possible socioeconomic reasons. But Barnes thought it was mostly about pests.

Past research had tied some of the asthma rate in African-Americans to dust mites and cockroach feces, exposures that are more likely in poor communities. Barnes saw many similarities between African-Americans and the Afro-Caribbeans of Barbados, with one important caveat: Unlike residents of Baltimore, where she would go to work for decades as a professor at the Johns Hopkins University, the Barbadians had only just begun to live in homes conducive to household pests. A natural experiment had begun.

Barnes lived in Barbados for a year, running a lab across the street from the Queen Elizabeth, visiting homes to gauge their exposures. At the time, many Barbadians lived in chattel houses, movable wooden homes to which many residents had added bit by bit, enclosing them in concrete structures, with indoor plumbing. Dust mites loved the enclosed homes: Some of the levels Barnes measured were the highest ever recorded, she says. Surely that had to explain some of the asthma rate.

It probably did, as did other factors in a rapidly modernizing country: shifting diet and microbiome, rising obesity, wealth—the type of influences that are often lumped together as “environment.” But controlling for those, Barnes saw that a disparity still remained between people descended directly from Africa and those who came through Europe. Something more fundamental was at play, she realized. Something that would shape the next 20 years of her work.

“It seemed like the missing piece,” she said, “was understanding the genetic basis for these complex diseases.”…

…Let’s stop here to note: If you took any section of a person’s DNA and compared it with a stranger’s, no matter their ethnic background, odds are high they’d be identical. This is not platitude: These odds guide large-scale genome sequencing. They are fundamental. Humanity is deeply shared. It just happened that when it comes to asthma, for this one gene variant, people of European and African descent are distinct. At some point, after they diverged in ancient times, a mutation had taken hold. It wasn’t about race. It was about contingency. History.

“One thing we can’t do is use race as a proxy,” says Carlos D. Bustamante, a genetics professor at Stanford University and a Barnes collaborator. “It’s a very blunt tool. But we also can’t say there are no genetic differences across populations. Because it’s just not true.”…

Read the entire article here.

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