Mixed Race Studies

Interethnic diversity of NAT2 polymorphisms in Brazilian admixed populations

BMC Genetics
Volume 11, Number 1 (2010-10-05)
pages 87-93
DOI: 10.1186/1471-2156-11-87

Jhimmy Talbot
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Luiz Alexandre V. Magno
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Cinthia VN Santana
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Sandra MB Sousa
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Paulo RS Melo
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Ronan X. Correa
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Giuliano Di Pietro
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Fabrício Rios-Santos
Laboratório de Farmacogenômica e Epidemiologia Molecular
Universidade Estadual de Santa Cruz

Background

N-acetyltransferase type 2 (Nat2) is a phase II drug- metabolizing enzyme that plays a key role in the bioactivation of aromatic and heterocyclic amines. Its relevance in drug metabolism and disease susceptibility remains a central theme for pharmacogenetic research, mainly because of its genetic variability among human populations. In fact, the evolutionary and ethnic-specific SNPs on the NAT2 gene remain a focus for the potential discoveries in personalized drug therapy and genetic markers of diseases. Despite the wide characterization of NAT2 SNPs frequency in established ethnic groups, little data are available for highly admixed populations. In this context, five common NAT2 SNPs (G191A, C481T, G590A, A803G and G857A) were investigated in a highly admixed population comprised of Afro-Brazilians, Whites, and Amerindians in northeastern Brazil. Thus, we sought to determine whether the distribution of NAT2 polymorphism is different among these three ethnic groups.

Results

Overall, there were no statistically significant differences in the distribution of NAT2 polymorphism when Afro-Brazilian and White groups were compared. Even the allele frequency of 191A, relatively common in African descendents, was not different between the Afro-Brazilian and White groups. However, allele and genotype frequencies of G590A were significantly higher in the Amerindian group than either in the Afro-Brazilian or White groups. Interestingly, a haplotype block between G590A and A803G was verified exclusively among Amerindians.

Conclusions

Our results indicate that ethnic admixture might contribute to a particular pattern of genetic diversity in the NAT2 gene and also offer new insights for the investigation of possible new NAT2 gene-environment effects in admixed populations.

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